Index

_

__init__() (brainstat.stats.SLM.SLM method) (brainstat.stats.terms.Random method) (brainstat.stats.terms.Term method)

A

apply_mask() (in module brainstat.stats.utils)

B

brainstat module brainstat.context module brainstat.context.genetics module brainstat.context.meta_analysis module brainstat.context.utils module brainstat.mesh module brainstat.mesh.data module brainstat.mesh.interpolate module brainstat.mesh.utils module brainstat.stats module brainstat.stats.SLM module brainstat.stats.terms module brainstat.stats.utils module brainstat.tests module brainstat.tests.conftest module brainstat.tests.test_f_test module

brainstat.tests.test_fdr module brainstat.tests.test_linear_model module brainstat.tests.test_mesh_edges module brainstat.tests.test_mesh_normalize module brainstat.tests.test_mesh_smooth module brainstat.tests.test_mesh_standardize module brainstat.tests.test_peak_clus module brainstat.tests.test_random_field_theory module brainstat.tests.test_resels module brainstat.tests.test_SLM module brainstat.tests.test_stat_threshold module brainstat.tests.test_t_test module brainstat.tests.testutil module brainstat.tutorial module brainstat.tutorial.utils module

C

check_duplicate_names() (in module brainstat.stats.terms) check_names() (in module brainstat.stats.terms) colon() (in module brainstat.stats.utils)

combine_parcellations() (in module brainstat.context.utils) cortical_ribbon() (in module brainstat.mesh.interpolate) create_parameter_grid() (in module brainstat.tests.test_SLM)

D

datadir() (in module brainstat.tests.testutil) dummy_test() (in module brainstat.tests.test_f_test) (in module brainstat.tests.test_fdr) (in module brainstat.tests.test_linear_model) (in module brainstat.tests.test_mesh_edges) (in module brainstat.tests.test_mesh_normalize) (in module brainstat.tests.test_mesh_smooth) (in module brainstat.tests.test_mesh_standardize) (in module brainstat.tests.test_peak_clus) (in module brainstat.tests.test_random_field_theory) (in module brainstat.tests.test_resels) (in module brainstat.tests.test_stat_threshold) (in module brainstat.tests.test_t_test)

F

f_test() (in module brainstat.stats.SLM) fdr() (brainstat.stats.SLM.SLM method) fetch_neurosynth_dataset() (in module brainstat.context.meta_analysis)

fetch_nimare_dataset() (in module brainstat.context.meta_analysis) fetch_tutorial_data() (in module brainstat.tutorial.utils) fit() (brainstat.stats.SLM.SLM method)

G

get_index() (in module brainstat.stats.terms)

I

interp1() (in module brainstat.stats.utils)

ismember() (in module brainstat.stats.utils)

L

linear_model() (brainstat.stats.SLM.SLM method)

load_enigma_histology() (in module brainstat.context.utils) load_mesh_labels() (in module brainstat.context.utils)

M

mesh_average() (in module brainstat.mesh.utils) mesh_edges() (in module brainstat.mesh.utils) mesh_normalize() (in module brainstat.mesh.data) mesh_smooth() (in module brainstat.mesh.data) mesh_standardize() (in module brainstat.mesh.data) module brainstat brainstat.context brainstat.context.genetics brainstat.context.meta_analysis brainstat.context.utils brainstat.mesh brainstat.mesh.data brainstat.mesh.interpolate brainstat.mesh.utils brainstat.stats brainstat.stats.SLM brainstat.stats.terms brainstat.stats.utils brainstat.tests brainstat.tests.conftest brainstat.tests.test_f_test brainstat.tests.test_fdr brainstat.tests.test_linear_model brainstat.tests.test_mesh_edges brainstat.tests.test_mesh_normalize brainstat.tests.test_mesh_smooth brainstat.tests.test_mesh_standardize brainstat.tests.test_peak_clus brainstat.tests.test_random_field_theory brainstat.tests.test_resels brainstat.tests.test_SLM brainstat.tests.test_stat_threshold brainstat.tests.test_t_test brainstat.tests.testutil brainstat.tutorial brainstat.tutorial.utils

multiple_comparison_corrections() (brainstat.stats.SLM.SLM method) mutli_surface_to_volume() (in module brainstat.context.utils)

P

pytest_configure() (in module brainstat.tests.conftest)

R

Random (class in brainstat.stats.terms) random_field_theory() (brainstat.stats.SLM.SLM method) read_surface_gz() (in module brainstat.context.utils)

remove_duplicate_columns() (in module brainstat.stats.terms) ribbon_interpolation() (in module brainstat.mesh.interpolate) row_ismember() (in module brainstat.stats.utils)

S

SLM (class in brainstat.stats.SLM) surface_decode_nimare() (in module brainstat.context.meta_analysis)

surface_genetic_expression() (in module brainstat.context.genetics) surface_to_volume() (in module brainstat.mesh.interpolate)

T

t_test() (brainstat.stats.SLM.SLM method) Term (class in brainstat.stats.terms) test_01() (in module brainstat.tests.test_f_test) (in module brainstat.tests.test_fdr) (in module brainstat.tests.test_linear_model) (in module brainstat.tests.test_mesh_edges) (in module brainstat.tests.test_mesh_normalize) (in module brainstat.tests.test_mesh_smooth) (in module brainstat.tests.test_mesh_standardize) (in module brainstat.tests.test_peak_clus) (in module brainstat.tests.test_random_field_theory) (in module brainstat.tests.test_resels) (in module brainstat.tests.test_stat_threshold) (in module brainstat.tests.test_t_test) test_02() (in module brainstat.tests.test_f_test) (in module brainstat.tests.test_fdr) (in module brainstat.tests.test_linear_model) (in module brainstat.tests.test_mesh_edges) (in module brainstat.tests.test_mesh_normalize) (in module brainstat.tests.test_mesh_smooth) (in module brainstat.tests.test_mesh_standardize) (in module brainstat.tests.test_peak_clus) (in module brainstat.tests.test_random_field_theory) (in module brainstat.tests.test_resels) (in module brainstat.tests.test_stat_threshold) (in module brainstat.tests.test_t_test) test_03() (in module brainstat.tests.test_f_test) (in module brainstat.tests.test_fdr) (in module brainstat.tests.test_linear_model) (in module brainstat.tests.test_mesh_edges) (in module brainstat.tests.test_mesh_normalize) (in module brainstat.tests.test_mesh_smooth) (in module brainstat.tests.test_mesh_standardize) (in module brainstat.tests.test_peak_clus) (in module brainstat.tests.test_random_field_theory) (in module brainstat.tests.test_resels) (in module brainstat.tests.test_stat_threshold) (in module brainstat.tests.test_t_test) test_04() (in module brainstat.tests.test_f_test) (in module brainstat.tests.test_fdr) (in module brainstat.tests.test_linear_model) (in module brainstat.tests.test_mesh_edges) (in module brainstat.tests.test_mesh_normalize) (in module brainstat.tests.test_mesh_smooth) (in module brainstat.tests.test_mesh_standardize) (in module brainstat.tests.test_peak_clus) (in module brainstat.tests.test_random_field_theory) (in module brainstat.tests.test_resels) (in module brainstat.tests.test_stat_threshold) (in module brainstat.tests.test_t_test) test_05() (in module brainstat.tests.test_f_test) (in module brainstat.tests.test_fdr) (in module brainstat.tests.test_linear_model) (in module brainstat.tests.test_mesh_smooth) (in module brainstat.tests.test_peak_clus) (in module brainstat.tests.test_random_field_theory) (in module brainstat.tests.test_resels) (in module brainstat.tests.test_stat_threshold) (in module brainstat.tests.test_t_test) test_06() (in module brainstat.tests.test_f_test) (in module brainstat.tests.test_fdr) (in module brainstat.tests.test_linear_model) (in module brainstat.tests.test_mesh_edges) (in module brainstat.tests.test_mesh_smooth) (in module brainstat.tests.test_peak_clus) (in module brainstat.tests.test_random_field_theory) (in module brainstat.tests.test_resels) (in module brainstat.tests.test_stat_threshold) (in module brainstat.tests.test_t_test) test_07() (in module brainstat.tests.test_f_test) (in module brainstat.tests.test_fdr) (in module brainstat.tests.test_linear_model) (in module brainstat.tests.test_mesh_smooth) (in module brainstat.tests.test_peak_clus) (in module brainstat.tests.test_random_field_theory) (in module brainstat.tests.test_resels) (in module brainstat.tests.test_stat_threshold) (in module brainstat.tests.test_t_test)

test_08() (in module brainstat.tests.test_f_test) (in module brainstat.tests.test_fdr) (in module brainstat.tests.test_linear_model) (in module brainstat.tests.test_mesh_smooth) (in module brainstat.tests.test_peak_clus) (in module brainstat.tests.test_random_field_theory) (in module brainstat.tests.test_resels) (in module brainstat.tests.test_stat_threshold) (in module brainstat.tests.test_t_test) test_09() (in module brainstat.tests.test_f_test) (in module brainstat.tests.test_fdr) (in module brainstat.tests.test_linear_model) (in module brainstat.tests.test_mesh_smooth) (in module brainstat.tests.test_peak_clus) (in module brainstat.tests.test_random_field_theory) (in module brainstat.tests.test_resels) (in module brainstat.tests.test_stat_threshold) (in module brainstat.tests.test_t_test) test_10() (in module brainstat.tests.test_f_test) (in module brainstat.tests.test_fdr) (in module brainstat.tests.test_linear_model) (in module brainstat.tests.test_mesh_smooth) (in module brainstat.tests.test_peak_clus) (in module brainstat.tests.test_random_field_theory) (in module brainstat.tests.test_resels) (in module brainstat.tests.test_stat_threshold) test_11() (in module brainstat.tests.test_f_test) (in module brainstat.tests.test_fdr) (in module brainstat.tests.test_linear_model) (in module brainstat.tests.test_peak_clus) (in module brainstat.tests.test_random_field_theory) (in module brainstat.tests.test_resels) (in module brainstat.tests.test_stat_threshold) test_12() (in module brainstat.tests.test_f_test) (in module brainstat.tests.test_fdr) (in module brainstat.tests.test_linear_model) (in module brainstat.tests.test_peak_clus) (in module brainstat.tests.test_resels) (in module brainstat.tests.test_stat_threshold) test_13() (in module brainstat.tests.test_fdr) (in module brainstat.tests.test_linear_model) (in module brainstat.tests.test_peak_clus) (in module brainstat.tests.test_random_field_theory) (in module brainstat.tests.test_resels) (in module brainstat.tests.test_stat_threshold) test_14() (in module brainstat.tests.test_fdr) (in module brainstat.tests.test_linear_model) (in module brainstat.tests.test_peak_clus) (in module brainstat.tests.test_random_field_theory) (in module brainstat.tests.test_stat_threshold) test_15() (in module brainstat.tests.test_linear_model) (in module brainstat.tests.test_peak_clus) (in module brainstat.tests.test_random_field_theory) (in module brainstat.tests.test_stat_threshold) test_16() (in module brainstat.tests.test_linear_model) (in module brainstat.tests.test_peak_clus) (in module brainstat.tests.test_random_field_theory) (in module brainstat.tests.test_stat_threshold) test_17() (in module brainstat.tests.test_peak_clus) (in module brainstat.tests.test_random_field_theory) test_18() (in module brainstat.tests.test_peak_clus) test_19() (in module brainstat.tests.test_peak_clus) (in module brainstat.tests.test_random_field_theory) test_20() (in module brainstat.tests.test_peak_clus) test_SLM() (in module brainstat.tests.test_SLM) to_df() (in module brainstat.stats.terms)

U

undo_mask() (in module brainstat.stats.utils)